NGS memo
2017年6月25日 星期日
DNA to RNA, Reverse Complement using perl one-liner
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Extract sequence from fasta using NGS tools : bedtools, samtools and gffread
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DEseq2 usage
Extract sequence from fasta using NGS tools : bedtools, samtools and gffread
Get sequences of rRNA, tRNA, snRNA and snoRNA from Rfam database
Create a folder for storing Rfam and downloading index file, family.txt. # Create and enter Rfam folder $ cd $HOME $ mkdir Rfam_ncRNA $ cd...
DEseq2 usage
DEseq2 installation source("https://bioconductor.org/biocLite.R") biocLite("DESeq2")
